Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd44P15379 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Cd44P15379 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd44P15379 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd44P15379 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Cd44P15379 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cd44P15379 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.97■□□□□ 0.47
Cd44P15379 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cd44P15379 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cd44P15379 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.97■□□□□ 0.47
Cd44P15379 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.97■□□□□ 0.47
Cd44P15379 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cd44P15379 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd44P15379 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cd44P15379 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cd44P15379 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.96■□□□□ 0.47
Cd44P15379 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Gm37292-201ENSMUST00000192062 758 ntBASIC17.96■□□□□ 0.47
Cd44P15379 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.96■□□□□ 0.47
Cd44P15379 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cd44P15379 Dancr-204ENSMUST00000132389 2347 ntBASIC17.96■□□□□ 0.47
Cd44P15379 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cd44P15379 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd44P15379 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cd44P15379 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd44P15379 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cd44P15379 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.95■□□□□ 0.46
Cd44P15379 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.95■□□□□ 0.46
Cd44P15379 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.95■□□□□ 0.46
Cd44P15379 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cd44P15379 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cd44P15379 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Cd44P15379 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd44P15379 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.94■□□□□ 0.46
Cd44P15379 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cd44P15379 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Gm13158-201ENSMUST00000122007 736 ntBASIC17.94■□□□□ 0.46
Cd44P15379 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.94■□□□□ 0.46
Cd44P15379 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.94■□□□□ 0.46
Cd44P15379 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cd44P15379 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cd44P15379 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms