Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 AA414768-201ENSMUST00000121924 1257 ntBASIC16.8■□□□□ 0.28
Srp54P14576 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.8■□□□□ 0.28
Srp54P14576 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Srp54P14576 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Srp54P14576 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srp54P14576 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Srp54P14576 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.79■□□□□ 0.28
Srp54P14576 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Srp54P14576 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Srp54P14576 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Srp54P14576 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Srp54P14576 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srp54P14576 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.78■□□□□ 0.28
Srp54P14576 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Srp54P14576 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Srp54P14576 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Srp54P14576 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Srp54P14576 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.78■□□□□ 0.28
Srp54P14576 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Srp54P14576 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srp54P14576 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Srp54P14576 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54P14576 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54P14576 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.77■□□□□ 0.28
Srp54P14576 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54P14576 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54P14576 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54P14576 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Srp54P14576 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Srp54P14576 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Srp54P14576 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54P14576 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.77■□□□□ 0.28
Srp54P14576 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Srp54P14576 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.77■□□□□ 0.28
Srp54P14576 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54P14576 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srp54P14576 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54P14576 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54P14576 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54P14576 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54P14576 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54P14576 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54P14576 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54P14576 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Srp54P14576 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srp54P14576 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Srp54P14576 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54P14576 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.76■□□□□ 0.27
Srp54P14576 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.76■□□□□ 0.27
Srp54P14576 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srp54P14576 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms