Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RaraP11416 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RaraP11416 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.51■□□□□ 0.55
RaraP11416 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RaraP11416 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RaraP11416 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RaraP11416 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.51■□□□□ 0.55
RaraP11416 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RaraP11416 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RaraP11416 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RaraP11416 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RaraP11416 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RaraP11416 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RaraP11416 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.5■□□□□ 0.55
RaraP11416 Gm10517-202ENSMUST00000192970 758 ntBASIC18.5■□□□□ 0.55
RaraP11416 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.5■□□□□ 0.55
RaraP11416 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.5■□□□□ 0.55
RaraP11416 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RaraP11416 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RaraP11416 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RaraP11416 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RaraP11416 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RaraP11416 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.49■□□□□ 0.55
RaraP11416 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RaraP11416 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RaraP11416 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RaraP11416 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.48■□□□□ 0.55
RaraP11416 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Gm12527-201ENSMUST00000117967 564 ntBASIC18.48■□□□□ 0.55
RaraP11416 Gm12382-201ENSMUST00000122005 922 ntBASIC18.48■□□□□ 0.55
RaraP11416 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.48■□□□□ 0.55
RaraP11416 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RaraP11416 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.48■□□□□ 0.55
RaraP11416 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RaraP11416 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RaraP11416 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RaraP11416 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.47■□□□□ 0.55
RaraP11416 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.47■□□□□ 0.55
RaraP11416 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RaraP11416 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.47■□□□□ 0.55
RaraP11416 Gm37856-201ENSMUST00000191634 999 ntBASIC18.47■□□□□ 0.55
RaraP11416 Gm43183-201ENSMUST00000200632 547 ntBASIC18.47■□□□□ 0.55
RaraP11416 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.47■□□□□ 0.55
RaraP11416 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
RaraP11416 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RaraP11416 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RaraP11416 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RaraP11416 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RaraP11416 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RaraP11416 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RaraP11416 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RaraP11416 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RaraP11416 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RaraP11416 Gm24841-201ENSMUST00000158676 357 ntBASIC18.46■□□□□ 0.55
RaraP11416 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.46■□□□□ 0.55
RaraP11416 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RaraP11416 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RaraP11416 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RaraP11416 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RaraP11416 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.46■□□□□ 0.55
RaraP11416 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RaraP11416 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms