Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Phf7-203ENSMUST00000226565 1971 ntBASIC13.15□□□□□ -0.3
Fn1P11276 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Fn1P11276 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.15□□□□□ -0.3
Fn1P11276 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.15□□□□□ -0.3
Fn1P11276 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.15□□□□□ -0.3
Fn1P11276 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Fn1P11276 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Fn1P11276 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.15□□□□□ -0.3
Fn1P11276 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.15□□□□□ -0.3
Fn1P11276 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fn1P11276 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Fn1P11276 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Fn1P11276 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Fn1P11276 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.14□□□□□ -0.31
Fn1P11276 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Gm13616-201ENSMUST00000120600 222 ntBASIC13.14□□□□□ -0.31
Fn1P11276 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Fn1P11276 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.14□□□□□ -0.31
Fn1P11276 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Fn1P11276 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.13□□□□□ -0.31
Fn1P11276 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.13□□□□□ -0.31
Fn1P11276 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.13□□□□□ -0.31
Fn1P11276 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.13□□□□□ -0.31
Fn1P11276 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.13□□□□□ -0.31
Fn1P11276 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Fn1P11276 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Fn1P11276 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Fn1P11276 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.12□□□□□ -0.31
Fn1P11276 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Fn1P11276 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Gm13186-201ENSMUST00000118031 316 ntBASIC13.12□□□□□ -0.31
Fn1P11276 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.12□□□□□ -0.31
Fn1P11276 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Fn1P11276 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Fn1P11276 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Fn1P11276 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fn1P11276 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fn1P11276 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fn1P11276 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Fn1P11276 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.11□□□□□ -0.31
Fn1P11276 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Fn1P11276 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.11□□□□□ -0.31
Fn1P11276 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms