Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Col4a1P02463 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a1P02463 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Col4a1P02463 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44357-201ENSMUST00000195897 142 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm19658-201ENSMUST00000196231 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44367-201ENSMUST00000196836 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44350-201ENSMUST00000197197 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44390-201ENSMUST00000197533 144 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44313-201ENSMUST00000198018 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44486-201ENSMUST00000198508 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44454-201ENSMUST00000198541 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44314-201ENSMUST00000199263 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44394-201ENSMUST00000199558 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44484-201ENSMUST00000199873 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44466-201ENSMUST00000200264 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Gm44359-201ENSMUST00000200671 138 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a1P02463 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a1P02463 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.04■□□□□ 0.96
Col4a1P02463 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a1P02463 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.04■□□□□ 0.96
Col4a1P02463 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a1P02463 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a1P02463 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a1P02463 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col4a1P02463 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a1P02463 Gm43347-201ENSMUST00000200226 580 ntBASIC21.03■□□□□ 0.96
Col4a1P02463 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.03■□□□□ 0.96
Col4a1P02463 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a1P02463 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a1P02463 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Col4a1P02463 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a1P02463 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a1P02463 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a1P02463 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col4a1P02463 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a1P02463 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a1P02463 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a1P02463 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a1P02463 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a1P02463 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a1P02463 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col4a1P02463 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.02■□□□□ 0.95
Col4a1P02463 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col4a1P02463 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.02■□□□□ 0.95
Col4a1P02463 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col4a1P02463 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.01■□□□□ 0.95
Col4a1P02463 Mir8098-201ENSMUST00000184011 137 ntBASIC21.01■□□□□ 0.95
Col4a1P02463 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Col4a1P02463 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a1P02463 Gfra2-202ENSMUST00000227633 1480 ntBASIC21■□□□□ 0.95
Col4a1P02463 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Col4a1P02463 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21■□□□□ 0.95
Col4a1P02463 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a1P02463 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Col4a1P02463 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a1P02463 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.99■□□□□ 0.95
Col4a1P02463 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Col4a1P02463 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a1P02463 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.99■□□□□ 0.95
Col4a1P02463 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Col4a1P02463 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a1P02463 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a1P02463 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a1P02463 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.98■□□□□ 0.95
Col4a1P02463 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a1P02463 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms