Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.69■□□□□ 0.42
CopeO89079 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.69■□□□□ 0.42
CopeO89079 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CopeO89079 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.68■□□□□ 0.42
CopeO89079 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CopeO89079 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Mir6349-201ENSMUST00000184059 97 ntBASIC17.68■□□□□ 0.42
CopeO89079 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.68■□□□□ 0.42
CopeO89079 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.68■□□□□ 0.42
CopeO89079 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CopeO89079 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CopeO89079 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.68■□□□□ 0.42
CopeO89079 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.68■□□□□ 0.42
CopeO89079 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CopeO89079 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopeO89079 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CopeO89079 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CopeO89079 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CopeO89079 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CopeO89079 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.67■□□□□ 0.42
CopeO89079 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CopeO89079 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CopeO89079 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.67■□□□□ 0.42
CopeO89079 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.66■□□□□ 0.42
CopeO89079 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.66■□□□□ 0.42
CopeO89079 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.66■□□□□ 0.42
CopeO89079 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CopeO89079 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.66■□□□□ 0.42
CopeO89079 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
CopeO89079 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CopeO89079 Gm26571-201ENSMUST00000181399 666 ntBASIC17.66■□□□□ 0.42
CopeO89079 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CopeO89079 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CopeO89079 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.65■□□□□ 0.42
CopeO89079 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopeO89079 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopeO89079 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopeO89079 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CopeO89079 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopeO89079 Gm13148-201ENSMUST00000118892 745 ntBASIC17.65■□□□□ 0.42
CopeO89079 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.65■□□□□ 0.42
CopeO89079 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.65■□□□□ 0.42
CopeO89079 Gm42569-201ENSMUST00000200539 472 ntBASIC17.65■□□□□ 0.42
CopeO89079 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopeO89079 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.65■□□□□ 0.42
CopeO89079 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CopeO89079 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CopeO89079 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CopeO89079 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CopeO89079 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.64■□□□□ 0.41
CopeO89079 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.64■□□□□ 0.41
CopeO89079 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.64■□□□□ 0.41
CopeO89079 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.64■□□□□ 0.41
CopeO89079 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CopeO89079 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CopeO89079 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CopeO89079 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CopeO89079 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CopeO89079 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms