Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.48■□□□□ 0.07
Abcd4O89016 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.48■□□□□ 0.07
Abcd4O89016 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Abcd4O89016 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Abcd4O89016 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Abcd4O89016 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.48■□□□□ 0.07
Abcd4O89016 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Abcd4O89016 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abcd4O89016 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Abcd4O89016 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.48■□□□□ 0.07
Abcd4O89016 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abcd4O89016 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Abcd4O89016 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abcd4O89016 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.47■□□□□ 0.07
Abcd4O89016 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Abcd4O89016 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.47■□□□□ 0.07
Abcd4O89016 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.47■□□□□ 0.07
Abcd4O89016 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abcd4O89016 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.47■□□□□ 0.07
Abcd4O89016 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Abcd4O89016 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Abcd4O89016 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abcd4O89016 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.47■□□□□ 0.07
Abcd4O89016 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abcd4O89016 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abcd4O89016 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Abcd4O89016 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Abcd4O89016 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.46■□□□□ 0.07
Abcd4O89016 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Abcd4O89016 Gm2274-201ENSMUST00000184539 609 ntBASIC15.46■□□□□ 0.07
Abcd4O89016 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.46■□□□□ 0.07
Abcd4O89016 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.46■□□□□ 0.07
Abcd4O89016 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abcd4O89016 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Abcd4O89016 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Abcd4O89016 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.45■□□□□ 0.06
Abcd4O89016 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.45■□□□□ 0.06
Abcd4O89016 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abcd4O89016 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Gm10013-201ENSMUST00000106074 672 ntBASIC15.44■□□□□ 0.06
Abcd4O89016 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.44■□□□□ 0.06
Abcd4O89016 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.44■□□□□ 0.06
Abcd4O89016 Gm45058-201ENSMUST00000205810 766 ntBASIC15.44■□□□□ 0.06
Abcd4O89016 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.44■□□□□ 0.06
Abcd4O89016 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Abcd4O89016 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abcd4O89016 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms