Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.45■□□□□ 0.22
Best1O88870 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Best1O88870 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.44■□□□□ 0.22
Best1O88870 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Best1O88870 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Best1O88870 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Best1O88870 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.44■□□□□ 0.22
Best1O88870 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.44■□□□□ 0.22
Best1O88870 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Best1O88870 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.44■□□□□ 0.22
Best1O88870 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Best1O88870 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.44■□□□□ 0.22
Best1O88870 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.44■□□□□ 0.22
Best1O88870 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Best1O88870 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Best1O88870 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Best1O88870 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.43■□□□□ 0.22
Best1O88870 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.43■□□□□ 0.22
Best1O88870 Gm21362-201ENSMUST00000194272 928 ntBASIC16.43■□□□□ 0.22
Best1O88870 Gm18115-201ENSMUST00000221209 621 ntBASIC16.43■□□□□ 0.22
Best1O88870 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Best1O88870 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.43■□□□□ 0.22
Best1O88870 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Best1O88870 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Best1O88870 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.42■□□□□ 0.22
Best1O88870 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.42■□□□□ 0.22
Best1O88870 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Gm29518-201ENSMUST00000190858 372 ntBASIC16.42■□□□□ 0.22
Best1O88870 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Best1O88870 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Best1O88870 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.41■□□□□ 0.22
Best1O88870 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Best1O88870 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.41■□□□□ 0.22
Best1O88870 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Best1O88870 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.41■□□□□ 0.22
Best1O88870 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.41■□□□□ 0.22
Best1O88870 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.41■□□□□ 0.22
Best1O88870 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Best1O88870 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Best1O88870 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Best1O88870 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Best1O88870 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Best1O88870 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Best1O88870 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms