Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm37025-201ENSMUST00000195159 829 ntBASIC17.48■□□□□ 0.39
ShdO88834 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ShdO88834 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.48■□□□□ 0.39
ShdO88834 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.48■□□□□ 0.39
ShdO88834 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.48■□□□□ 0.39
ShdO88834 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ShdO88834 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
ShdO88834 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
ShdO88834 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShdO88834 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ShdO88834 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
ShdO88834 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ShdO88834 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ShdO88834 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.47■□□□□ 0.39
ShdO88834 Gm17661-201ENSMUST00000170317 270 ntBASIC17.47■□□□□ 0.39
ShdO88834 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
ShdO88834 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShdO88834 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ShdO88834 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ShdO88834 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.46■□□□□ 0.39
ShdO88834 Gm3375-201ENSMUST00000203929 796 ntBASIC17.46■□□□□ 0.39
ShdO88834 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ShdO88834 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShdO88834 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.46■□□□□ 0.38
ShdO88834 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ShdO88834 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.45■□□□□ 0.38
ShdO88834 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.45■□□□□ 0.38
ShdO88834 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Gm9731-201ENSMUST00000209480 747 ntBASIC17.45■□□□□ 0.38
ShdO88834 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.45■□□□□ 0.38
ShdO88834 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.45■□□□□ 0.38
ShdO88834 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ShdO88834 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShdO88834 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ShdO88834 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ShdO88834 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ShdO88834 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.44■□□□□ 0.38
ShdO88834 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.44■□□□□ 0.38
ShdO88834 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.44■□□□□ 0.38
ShdO88834 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ShdO88834 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.44■□□□□ 0.38
ShdO88834 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.44■□□□□ 0.38
ShdO88834 Odf3b-204ENSMUST00000227834 930 ntBASIC17.44■□□□□ 0.38
ShdO88834 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShdO88834 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms