Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.89■□□□□ 0.93
Cops6O88545 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Cops6O88545 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cops6O88545 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cops6O88545 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cops6O88545 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 Gm15794-201ENSMUST00000120182 631 ntBASIC20.88■□□□□ 0.93
Cops6O88545 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cops6O88545 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cops6O88545 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Cops6O88545 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Cops6O88545 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.88■□□□□ 0.93
Cops6O88545 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops6O88545 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.87■□□□□ 0.93
Cops6O88545 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.87■□□□□ 0.93
Cops6O88545 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Cops6O88545 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.87■□□□□ 0.93
Cops6O88545 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.87■□□□□ 0.93
Cops6O88545 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops6O88545 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.86■□□□□ 0.93
Cops6O88545 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cops6O88545 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.86■□□□□ 0.93
Cops6O88545 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cops6O88545 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.86■□□□□ 0.93
Cops6O88545 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cops6O88545 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops6O88545 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.86■□□□□ 0.93
Cops6O88545 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.85■□□□□ 0.93
Cops6O88545 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.85■□□□□ 0.93
Cops6O88545 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cops6O88545 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cops6O88545 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cops6O88545 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cops6O88545 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cops6O88545 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.84■□□□□ 0.93
Cops6O88545 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cops6O88545 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cops6O88545 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cops6O88545 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cops6O88545 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cops6O88545 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.83■□□□□ 0.93
Cops6O88545 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cops6O88545 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.83■□□□□ 0.92
Cops6O88545 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cops6O88545 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cops6O88545 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms