Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gm10226O88253 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm10226O88253 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Gm10226O88253 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm10226O88253 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm10226O88253 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm10226O88253 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm10226O88253 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.19□□□□□ -0.3
Gm10226O88253 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm10226O88253 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.19□□□□□ -0.3
Gm10226O88253 Gm23634-201ENSMUST00000175071 91 ntBASIC13.19□□□□□ -0.3
Gm10226O88253 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Gm10226O88253 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm10226O88253 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Gm10226O88253 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm10226O88253 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.19□□□□□ -0.3
Gm10226O88253 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Gm10226O88253 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm10226O88253 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.19□□□□□ -0.3
Gm10226O88253 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm10226O88253 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm10226O88253 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.18□□□□□ -0.3
Gm10226O88253 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gm10226O88253 Gm26039-201ENSMUST00000158152 144 ntBASIC13.18□□□□□ -0.3
Gm10226O88253 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.18□□□□□ -0.3
Gm10226O88253 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm10226O88253 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Gm10566-201ENSMUST00000086739 996 ntBASIC13.18□□□□□ -0.3
Gm10226O88253 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.18□□□□□ -0.3
Gm10226O88253 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm10226O88253 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm10226O88253 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm10226O88253 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm10226O88253 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm10226O88253 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm10226O88253 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Rarb-207ENSMUST00000225921 2756 ntBASIC13.17□□□□□ -0.3
Gm10226O88253 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm10226O88253 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm10226O88253 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms