Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
Ubr1O70481 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Ubr1O70481 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr1O70481 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr1O70481 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ubr1O70481 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC22.2■■□□□ 1.14
Ubr1O70481 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr1O70481 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC22.2■■□□□ 1.14
Ubr1O70481 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Ubr1O70481 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr1O70481 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Ubr1O70481 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr1O70481 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr1O70481 Gm7935-201ENSMUST00000100555 1278 ntBASIC22.2■■□□□ 1.14
Ubr1O70481 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ubr1O70481 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubr1O70481 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Ubr1O70481 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 Gfra2-202ENSMUST00000227633 1480 ntBASIC22.19■■□□□ 1.14
Ubr1O70481 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 Gm12644-201ENSMUST00000119935 606 ntBASIC22.19■■□□□ 1.14
Ubr1O70481 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC22.19■■□□□ 1.14
Ubr1O70481 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubr1O70481 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Ubr1O70481 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ubr1O70481 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr1O70481 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC22.18■■□□□ 1.14
Ubr1O70481 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC22.18■■□□□ 1.14
Ubr1O70481 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr1O70481 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr1O70481 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr1O70481 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ubr1O70481 Cmtm5-203ENSMUST00000227441 610 ntBASIC22.17■■□□□ 1.14
Ubr1O70481 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Ubr1O70481 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Rprl3-201ENSMUST00000157400 290 ntBASIC22.17■■□□□ 1.14
Ubr1O70481 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC22.17■■□□□ 1.14
Ubr1O70481 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubr1O70481 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr1O70481 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr1O70481 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC22.16■■□□□ 1.14
Ubr1O70481 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr1O70481 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr1O70481 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr1O70481 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr1O70481 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr1O70481 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubr1O70481 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr1O70481 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr1O70481 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC22.15■■□□□ 1.14
Ubr1O70481 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr1O70481 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Ubr1O70481 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr1O70481 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr1O70481 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Ubr1O70481 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ubr1O70481 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Ubr1O70481 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ubr1O70481 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC22.15■■□□□ 1.14
Ubr1O70481 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr1O70481 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr1O70481 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC22.15■■□□□ 1.14
Ubr1O70481 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC22.15■■□□□ 1.14
Ubr1O70481 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ubr1O70481 Gm8969-201ENSMUST00000199694 526 ntBASIC22.15■■□□□ 1.14
Ubr1O70481 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ubr1O70481 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ubr1O70481 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ubr1O70481 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC22.14■■□□□ 1.13
Ubr1O70481 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ubr1O70481 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Ubr1O70481 Gm5864-201ENSMUST00000202263 970 ntBASIC22.14■■□□□ 1.13
Ubr1O70481 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC22.14■■□□□ 1.13
Ubr1O70481 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ubr1O70481 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC22.13■■□□□ 1.13
Ubr1O70481 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC22.13■■□□□ 1.13
Ubr1O70481 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms