Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.88■□□□□ 0.29
Pdlim1O70400 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 Gm16061-201ENSMUST00000122167 857 ntBASIC16.88■□□□□ 0.29
Pdlim1O70400 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pdlim1O70400 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pdlim1O70400 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pdlim1O70400 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdlim1O70400 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.87■□□□□ 0.29
Pdlim1O70400 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pdlim1O70400 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.87■□□□□ 0.29
Pdlim1O70400 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.87■□□□□ 0.29
Pdlim1O70400 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Pdlim1O70400 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdlim1O70400 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pdlim1O70400 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pdlim1O70400 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.86■□□□□ 0.29
Pdlim1O70400 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pdlim1O70400 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.86■□□□□ 0.29
Pdlim1O70400 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pdlim1O70400 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim1O70400 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.85■□□□□ 0.29
Pdlim1O70400 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Pdlim1O70400 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Pdlim1O70400 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.85■□□□□ 0.29
Pdlim1O70400 Gm18958-201ENSMUST00000174258 762 ntBASIC16.85■□□□□ 0.29
Pdlim1O70400 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.85■□□□□ 0.29
Pdlim1O70400 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim1O70400 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pdlim1O70400 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pdlim1O70400 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.84■□□□□ 0.29
Pdlim1O70400 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.84■□□□□ 0.29
Pdlim1O70400 Gm27000-201ENSMUST00000182943 842 ntBASIC16.84■□□□□ 0.29
Pdlim1O70400 Gm7889-201ENSMUST00000185591 958 ntBASIC16.84■□□□□ 0.29
Pdlim1O70400 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pdlim1O70400 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim1O70400 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pdlim1O70400 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pdlim1O70400 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.83■□□□□ 0.28
Pdlim1O70400 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim1O70400 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms