Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp8O70138 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp8O70138 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Mmp8O70138 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp8O70138 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.86■□□□□ 0.93
Mmp8O70138 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp8O70138 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.86■□□□□ 0.93
Mmp8O70138 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp8O70138 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.86■□□□□ 0.93
Mmp8O70138 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp8O70138 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.85■□□□□ 0.93
Mmp8O70138 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Mmp8O70138 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Mmp8O70138 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.85■□□□□ 0.93
Mmp8O70138 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp8O70138 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.84■□□□□ 0.93
Mmp8O70138 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.84■□□□□ 0.93
Mmp8O70138 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp8O70138 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp8O70138 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp8O70138 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp8O70138 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp8O70138 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.84■□□□□ 0.93
Mmp8O70138 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Mmp8O70138 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Mmp8O70138 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Mmp8O70138 Gm45058-201ENSMUST00000205810 766 ntBASIC20.84■□□□□ 0.93
Mmp8O70138 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp8O70138 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp8O70138 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Mmp8O70138 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.84■□□□□ 0.93
Mmp8O70138 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp8O70138 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp8O70138 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Mmp8O70138 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp8O70138 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp8O70138 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp8O70138 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp8O70138 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp8O70138 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp8O70138 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.83■□□□□ 0.93
Mmp8O70138 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.83■□□□□ 0.93
Mmp8O70138 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mmp8O70138 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Mmp8O70138 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.83■□□□□ 0.92
Mmp8O70138 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.82■□□□□ 0.92
Mmp8O70138 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.82■□□□□ 0.92
Mmp8O70138 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.82■□□□□ 0.92
Mmp8O70138 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Mmp8O70138 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp8O70138 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp8O70138 Gm18959-201ENSMUST00000208954 655 ntBASIC20.82■□□□□ 0.92
Mmp8O70138 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Mmp8O70138 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.82■□□□□ 0.92
Mmp8O70138 Gm9987-201ENSMUST00000069768 567 ntBASIC20.82■□□□□ 0.92
Mmp8O70138 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.82■□□□□ 0.92
Mmp8O70138 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp8O70138 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp8O70138 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.82■□□□□ 0.92
Mmp8O70138 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Mmp8O70138 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Mmp8O70138 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.81■□□□□ 0.92
Mmp8O70138 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Mmp8O70138 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Mmp8O70138 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.81■□□□□ 0.92
Mmp8O70138 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Mmp8O70138 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp8O70138 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp8O70138 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp8O70138 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp8O70138 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp8O70138 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Mmp8O70138 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Mmp8O70138 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Mmp8O70138 Gm13474-201ENSMUST00000122466 815 ntBASIC20.8■□□□□ 0.92
Mmp8O70138 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.8■□□□□ 0.92
Mmp8O70138 Mir5130-201ENSMUST00000175160 84 ntBASIC20.8■□□□□ 0.92
Mmp8O70138 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Mmp8O70138 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Mmp8O70138 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms