Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Rdh5O55240 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.21■□□□□ 0.19
Rdh5O55240 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rdh5O55240 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.21■□□□□ 0.19
Rdh5O55240 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Rdh5O55240 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.21■□□□□ 0.19
Rdh5O55240 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.21■□□□□ 0.19
Rdh5O55240 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh5O55240 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rdh5O55240 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rdh5O55240 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rdh5O55240 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rdh5O55240 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.2■□□□□ 0.18
Rdh5O55240 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.2■□□□□ 0.18
Rdh5O55240 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.2■□□□□ 0.18
Rdh5O55240 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rdh5O55240 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rdh5O55240 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh5O55240 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.19■□□□□ 0.18
Rdh5O55240 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rdh5O55240 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Gm12085-201ENSMUST00000119263 940 ntBASIC16.19■□□□□ 0.18
Rdh5O55240 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.19■□□□□ 0.18
Rdh5O55240 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rdh5O55240 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rdh5O55240 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rdh5O55240 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh5O55240 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rdh5O55240 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rdh5O55240 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.18■□□□□ 0.18
Rdh5O55240 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.18■□□□□ 0.18
Rdh5O55240 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.18■□□□□ 0.18
Rdh5O55240 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.18■□□□□ 0.18
Rdh5O55240 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rdh5O55240 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh5O55240 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rdh5O55240 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rdh5O55240 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.17■□□□□ 0.18
Rdh5O55240 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh5O55240 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
Rdh5O55240 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh5O55240 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms