Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SncaO55042 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SncaO55042 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SncaO55042 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.19□□□□□ -0.14
SncaO55042 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.19□□□□□ -0.14
SncaO55042 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SncaO55042 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SncaO55042 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.18□□□□□ -0.14
SncaO55042 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.18□□□□□ -0.14
SncaO55042 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.18□□□□□ -0.14
SncaO55042 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Gm11927-201ENSMUST00000118472 759 ntBASIC14.18□□□□□ -0.14
SncaO55042 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.18□□□□□ -0.14
SncaO55042 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SncaO55042 Gm8495-201ENSMUST00000188740 694 ntBASIC14.18□□□□□ -0.14
SncaO55042 Gm26524-201ENSMUST00000192339 390 ntBASIC14.18□□□□□ -0.14
SncaO55042 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SncaO55042 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.18□□□□□ -0.14
SncaO55042 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SncaO55042 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.17□□□□□ -0.14
SncaO55042 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SncaO55042 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.17□□□□□ -0.14
SncaO55042 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.17□□□□□ -0.14
SncaO55042 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.17□□□□□ -0.14
SncaO55042 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SncaO55042 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SncaO55042 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.16□□□□□ -0.14
SncaO55042 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SncaO55042 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SncaO55042 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SncaO55042 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.16□□□□□ -0.14
SncaO55042 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.16□□□□□ -0.14
SncaO55042 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.16□□□□□ -0.14
SncaO55042 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SncaO55042 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SncaO55042 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SncaO55042 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.16□□□□□ -0.14
SncaO55042 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SncaO55042 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SncaO55042 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms