Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Kcnu1O54982 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Kcnu1O54982 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Kcnu1O54982 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Kcnu1O54982 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Kcnu1O54982 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Kcnu1O54982 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Kcnu1O54982 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Gm12085-201ENSMUST00000119263 940 ntBASIC18.2■□□□□ 0.5
Kcnu1O54982 Gm13168-201ENSMUST00000121771 632 ntBASIC18.2■□□□□ 0.5
Kcnu1O54982 Gm17661-201ENSMUST00000170317 270 ntBASIC18.2■□□□□ 0.5
Kcnu1O54982 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Kcnu1O54982 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Kcnu1O54982 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Kcnu1O54982 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Kcnu1O54982 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.19■□□□□ 0.5
Kcnu1O54982 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Kcnu1O54982 Gm13216-201ENSMUST00000117145 591 ntBASIC18.19■□□□□ 0.5
Kcnu1O54982 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Kcnu1O54982 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Kcnu1O54982 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.18■□□□□ 0.5
Kcnu1O54982 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Haglr-201ENSMUST00000100000 2085 ntBASIC18.18■□□□□ 0.5
Kcnu1O54982 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.18■□□□□ 0.5
Kcnu1O54982 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Kcnu1O54982 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Kcnu1O54982 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Kcnu1O54982 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Kcnu1O54982 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Kcnu1O54982 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Mir1199-201ENSMUST00000117015 119 ntBASIC18.17■□□□□ 0.5
Kcnu1O54982 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.17■□□□□ 0.5
Kcnu1O54982 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Kcnu1O54982 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.17■□□□□ 0.5
Kcnu1O54982 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Kcnu1O54982 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Kcnu1O54982 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.16■□□□□ 0.5
Kcnu1O54982 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Kcnu1O54982 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.16■□□□□ 0.5
Kcnu1O54982 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.16■□□□□ 0.5
Kcnu1O54982 Gm37025-201ENSMUST00000195159 829 ntBASIC18.16■□□□□ 0.5
Kcnu1O54982 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Kcnu1O54982 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Kcnu1O54982 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms