Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Smarce1O54941 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Gm10602-201ENSMUST00000098239 609 ntBASIC20.35■□□□□ 0.85
Smarce1O54941 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarce1O54941 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Smarce1O54941 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Smarce1O54941 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.34■□□□□ 0.85
Smarce1O54941 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.34■□□□□ 0.85
Smarce1O54941 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Smarce1O54941 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Smarce1O54941 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarce1O54941 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarce1O54941 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarce1O54941 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarce1O54941 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarce1O54941 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarce1O54941 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarce1O54941 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarce1O54941 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.33■□□□□ 0.85
Smarce1O54941 Gm18025-201ENSMUST00000221733 862 ntBASIC20.33■□□□□ 0.85
Smarce1O54941 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smarce1O54941 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.33■□□□□ 0.84
Smarce1O54941 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarce1O54941 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarce1O54941 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarce1O54941 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarce1O54941 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarce1O54941 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.33■□□□□ 0.84
Smarce1O54941 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarce1O54941 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smarce1O54941 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Smarce1O54941 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.32■□□□□ 0.84
Smarce1O54941 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.32■□□□□ 0.84
Smarce1O54941 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smarce1O54941 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarce1O54941 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarce1O54941 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.31■□□□□ 0.84
Smarce1O54941 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.31■□□□□ 0.84
Smarce1O54941 Gm4974-201ENSMUST00000209974 875 ntBASIC20.31■□□□□ 0.84
Smarce1O54941 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.31■□□□□ 0.84
Smarce1O54941 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarce1O54941 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smarce1O54941 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Smarce1O54941 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarce1O54941 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarce1O54941 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarce1O54941 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarce1O54941 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarce1O54941 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarce1O54941 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Smarce1O54941 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarce1O54941 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.3■□□□□ 0.84
Smarce1O54941 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarce1O54941 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms