Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
ChkaO54804 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.28■□□□□ 0.36
ChkaO54804 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.28■□□□□ 0.36
ChkaO54804 Gm18666-201ENSMUST00000190039 958 ntBASIC17.28■□□□□ 0.36
ChkaO54804 Gm43183-201ENSMUST00000200632 547 ntBASIC17.28■□□□□ 0.36
ChkaO54804 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ChkaO54804 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ChkaO54804 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ChkaO54804 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ChkaO54804 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ChkaO54804 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.27■□□□□ 0.36
ChkaO54804 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.27■□□□□ 0.35
ChkaO54804 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ChkaO54804 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ChkaO54804 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ChkaO54804 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ChkaO54804 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Gm13216-201ENSMUST00000117145 591 ntBASIC17.26■□□□□ 0.35
ChkaO54804 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ChkaO54804 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Gm24841-201ENSMUST00000158676 357 ntBASIC17.25■□□□□ 0.35
ChkaO54804 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ChkaO54804 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.24■□□□□ 0.35
ChkaO54804 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.24■□□□□ 0.35
ChkaO54804 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.24■□□□□ 0.35
ChkaO54804 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ChkaO54804 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ChkaO54804 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ChkaO54804 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ChkaO54804 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.23■□□□□ 0.35
ChkaO54804 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ChkaO54804 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ChkaO54804 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ChkaO54804 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms