Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Gm23634-201ENSMUST00000175071 91 ntBASIC17.36■□□□□ 0.37
Limk2O54785 Gm27463-201ENSMUST00000183569 57 ntBASIC17.36■□□□□ 0.37
Limk2O54785 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.36■□□□□ 0.37
Limk2O54785 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.36■□□□□ 0.37
Limk2O54785 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.36■□□□□ 0.37
Limk2O54785 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Limk2O54785 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Limk2O54785 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Limk2O54785 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Limk2O54785 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Limk2O54785 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Limk2O54785 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Limk2O54785 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Gm10013-201ENSMUST00000106074 672 ntBASIC17.35■□□□□ 0.37
Limk2O54785 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.35■□□□□ 0.37
Limk2O54785 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limk2O54785 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.35■□□□□ 0.37
Limk2O54785 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.35■□□□□ 0.37
Limk2O54785 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Limk2O54785 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Limk2O54785 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Gm45058-201ENSMUST00000205810 766 ntBASIC17.34■□□□□ 0.37
Limk2O54785 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.34■□□□□ 0.37
Limk2O54785 Il3ra-202ENSMUST00000223589 738 ntBASIC17.34■□□□□ 0.37
Limk2O54785 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limk2O54785 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limk2O54785 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limk2O54785 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limk2O54785 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limk2O54785 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limk2O54785 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limk2O54785 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Limk2O54785 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Limk2O54785 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Limk2O54785 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limk2O54785 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limk2O54785 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Limk2O54785 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limk2O54785 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Limk2O54785 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Limk2O54785 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.32■□□□□ 0.36
Limk2O54785 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Limk2O54785 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Limk2O54785 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Limk2O54785 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.32■□□□□ 0.36
Limk2O54785 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.32■□□□□ 0.36
Limk2O54785 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Limk2O54785 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 Gm18032-201ENSMUST00000222541 538 ntBASIC17.32■□□□□ 0.36
Limk2O54785 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.32■□□□□ 0.36
Limk2O54785 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Limk2O54785 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.32■□□□□ 0.36
Limk2O54785 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.32■□□□□ 0.36
Limk2O54785 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Limk2O54785 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Limk2O54785 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms