Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.4□□□□□ -0.1
Ccr6O54689 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Ccr6O54689 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccr6O54689 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccr6O54689 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccr6O54689 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccr6O54689 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccr6O54689 Gm38285-201ENSMUST00000192928 922 ntBASIC14.4□□□□□ -0.1
Ccr6O54689 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Ccr6O54689 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.4□□□□□ -0.1
Ccr6O54689 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccr6O54689 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ccr6O54689 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.4□□□□□ -0.1
Ccr6O54689 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccr6O54689 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccr6O54689 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccr6O54689 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccr6O54689 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Ccr6O54689 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccr6O54689 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccr6O54689 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccr6O54689 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.39□□□□□ -0.11
Ccr6O54689 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccr6O54689 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccr6O54689 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ccr6O54689 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Reep4-203ENSMUST00000226563 1444 ntBASIC14.39□□□□□ -0.11
Ccr6O54689 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccr6O54689 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccr6O54689 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccr6O54689 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccr6O54689 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccr6O54689 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccr6O54689 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ccr6O54689 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccr6O54689 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccr6O54689 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccr6O54689 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccr6O54689 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.37□□□□□ -0.11
Ccr6O54689 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccr6O54689 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccr6O54689 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms