Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn3O35701 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn3O35701 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn3O35701 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Matn3O35701 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Matn3O35701 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Matn3O35701 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn3O35701 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn3O35701 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Matn3O35701 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Matn3O35701 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Matn3O35701 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Matn3O35701 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Matn3O35701 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Matn3O35701 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Matn3O35701 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Matn3O35701 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Matn3O35701 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Matn3O35701 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Matn3O35701 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Matn3O35701 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Matn3O35701 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Matn3O35701 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Matn3O35701 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
Matn3O35701 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.58■□□□□ 0.08
Matn3O35701 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.58■□□□□ 0.08
Matn3O35701 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.58■□□□□ 0.08
Matn3O35701 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Matn3O35701 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Matn3O35701 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Matn3O35701 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.58■□□□□ 0.08
Matn3O35701 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Matn3O35701 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Matn3O35701 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.58■□□□□ 0.08
Matn3O35701 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.57■□□□□ 0.08
Matn3O35701 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Matn3O35701 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Matn3O35701 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Matn3O35701 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Matn3O35701 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.57■□□□□ 0.08
Matn3O35701 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Matn3O35701 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Matn3O35701 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Matn3O35701 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Matn3O35701 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Matn3O35701 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.56■□□□□ 0.08
Matn3O35701 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Matn3O35701 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Matn3O35701 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Matn3O35701 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.56■□□□□ 0.08
Matn3O35701 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Matn3O35701 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Matn3O35701 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Matn3O35701 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Matn3O35701 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Matn3O35701 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Matn3O35701 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Matn3O35701 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.55■□□□□ 0.08
Matn3O35701 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Matn3O35701 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.55■□□□□ 0.08
Matn3O35701 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Matn3O35701 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Matn3O35701 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Matn3O35701 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Matn3O35701 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Gm13534-201ENSMUST00000121169 513 ntBASIC15.54■□□□□ 0.08
Matn3O35701 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Matn3O35701 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Matn3O35701 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms