Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Npc1O35604 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.71■□□□□ 0.27
Npc1O35604 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Npc1O35604 Mir8112-201ENSMUST00000184382 131 ntBASIC16.71■□□□□ 0.27
Npc1O35604 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.71■□□□□ 0.27
Npc1O35604 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Npc1O35604 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npc1O35604 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Npc1O35604 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.7■□□□□ 0.26
Npc1O35604 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Npc1O35604 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.7■□□□□ 0.26
Npc1O35604 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.7■□□□□ 0.26
Npc1O35604 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.7■□□□□ 0.26
Npc1O35604 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Gm9987-201ENSMUST00000069768 567 ntBASIC16.7■□□□□ 0.26
Npc1O35604 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.7■□□□□ 0.26
Npc1O35604 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Npc1O35604 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npc1O35604 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Npc1O35604 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
Npc1O35604 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.69■□□□□ 0.26
Npc1O35604 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Npc1O35604 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.69■□□□□ 0.26
Npc1O35604 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Npc1O35604 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.69■□□□□ 0.26
Npc1O35604 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Npc1O35604 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Npc1O35604 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.68■□□□□ 0.26
Npc1O35604 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Npc1O35604 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Gm2274-201ENSMUST00000184539 609 ntBASIC16.68■□□□□ 0.26
Npc1O35604 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.68■□□□□ 0.26
Npc1O35604 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Npc1O35604 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Npc1O35604 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Npc1O35604 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.68■□□□□ 0.26
Npc1O35604 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Npc1O35604 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Npc1O35604 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Npc1O35604 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Npc1O35604 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Npc1O35604 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Npc1O35604 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Npc1O35604 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Npc1O35604 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Npc1O35604 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Npc1O35604 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.67■□□□□ 0.26
Npc1O35604 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Npc1O35604 Gm7638-201ENSMUST00000121348 967 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms