Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.07■□□□□ 0.16
Abca4O35600 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Abca4O35600 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.07■□□□□ 0.16
Abca4O35600 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.07■□□□□ 0.16
Abca4O35600 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Abca4O35600 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca4O35600 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Abca4O35600 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.06■□□□□ 0.16
Abca4O35600 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.06■□□□□ 0.16
Abca4O35600 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca4O35600 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca4O35600 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca4O35600 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Abca4O35600 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca4O35600 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.06■□□□□ 0.16
Abca4O35600 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca4O35600 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.06■□□□□ 0.16
Abca4O35600 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.06■□□□□ 0.16
Abca4O35600 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Abca4O35600 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.05■□□□□ 0.16
Abca4O35600 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.05■□□□□ 0.16
Abca4O35600 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.05■□□□□ 0.16
Abca4O35600 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Abca4O35600 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Abca4O35600 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Abca4O35600 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Abca4O35600 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Abca4O35600 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.05■□□□□ 0.16
Abca4O35600 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Abca4O35600 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Abca4O35600 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Gm4535-201ENSMUST00000182274 558 ntBASIC16.04■□□□□ 0.16
Abca4O35600 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Gm10355-201ENSMUST00000097146 517 ntBASIC16.04■□□□□ 0.16
Abca4O35600 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Abca4O35600 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.04■□□□□ 0.16
Abca4O35600 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.03■□□□□ 0.16
Abca4O35600 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.03■□□□□ 0.16
Abca4O35600 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.03■□□□□ 0.16
Abca4O35600 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.03■□□□□ 0.16
Abca4O35600 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Abca4O35600 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.03■□□□□ 0.16
Abca4O35600 Mir8117-201ENSMUST00000184773 107 ntBASIC16.03■□□□□ 0.16
Abca4O35600 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Abca4O35600 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.03■□□□□ 0.16
Abca4O35600 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.03■□□□□ 0.16
Abca4O35600 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Abca4O35600 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Abca4O35600 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Abca4O35600 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Abca4O35600 Gm13616-201ENSMUST00000120600 222 ntBASIC16.02■□□□□ 0.16
Abca4O35600 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.02■□□□□ 0.16
Abca4O35600 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.02■□□□□ 0.16
Abca4O35600 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.02■□□□□ 0.16
Abca4O35600 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Abca4O35600 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms