Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
Clk3O35492 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Clk3O35492 Mir6349-201ENSMUST00000184059 97 ntBASIC16.29■□□□□ 0.2
Clk3O35492 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 Mtag2-201ENSMUST00000058665 714 ntBASIC16.29■□□□□ 0.2
Clk3O35492 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Clk3O35492 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.29■□□□□ 0.2
Clk3O35492 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clk3O35492 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.28■□□□□ 0.2
Clk3O35492 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clk3O35492 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.28■□□□□ 0.2
Clk3O35492 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Clk3O35492 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk3O35492 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clk3O35492 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk3O35492 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk3O35492 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clk3O35492 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.27■□□□□ 0.2
Clk3O35492 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk3O35492 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.27■□□□□ 0.2
Clk3O35492 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.27■□□□□ 0.2
Clk3O35492 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.27■□□□□ 0.2
Clk3O35492 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Clk3O35492 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.27■□□□□ 0.2
Clk3O35492 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk3O35492 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.26■□□□□ 0.19
Clk3O35492 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.26■□□□□ 0.19
Clk3O35492 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk3O35492 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.25■□□□□ 0.19
Clk3O35492 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clk3O35492 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.25■□□□□ 0.19
Clk3O35492 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Clk3O35492 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clk3O35492 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Gm15375-201ENSMUST00000119510 849 ntBASIC16.25■□□□□ 0.19
Clk3O35492 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Gm8520-201ENSMUST00000186517 868 ntBASIC16.25■□□□□ 0.19
Clk3O35492 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.25■□□□□ 0.19
Clk3O35492 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clk3O35492 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.25■□□□□ 0.19
Clk3O35492 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clk3O35492 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.25■□□□□ 0.19
Clk3O35492 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms