Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Clk2O35491 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk2O35491 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Clk2O35491 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.61■□□□□ 0.57
Clk2O35491 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Clk2O35491 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Clk2O35491 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.61■□□□□ 0.57
Clk2O35491 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.61■□□□□ 0.57
Clk2O35491 Gm7367-201ENSMUST00000057611 492 ntBASIC18.61■□□□□ 0.57
Clk2O35491 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clk2O35491 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk2O35491 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.6■□□□□ 0.57
Clk2O35491 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.6■□□□□ 0.57
Clk2O35491 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.6■□□□□ 0.57
Clk2O35491 Gm29518-201ENSMUST00000190858 372 ntBASIC18.6■□□□□ 0.57
Clk2O35491 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clk2O35491 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.6■□□□□ 0.57
Clk2O35491 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Clk2O35491 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Clk2O35491 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Clk2O35491 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Clk2O35491 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Gm37722-201ENSMUST00000193757 208 ntBASIC18.59■□□□□ 0.57
Clk2O35491 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.59■□□□□ 0.57
Clk2O35491 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Clk2O35491 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.59■□□□□ 0.57
Clk2O35491 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clk2O35491 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clk2O35491 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clk2O35491 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.58■□□□□ 0.57
Clk2O35491 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Clk2O35491 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clk2O35491 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Clk2O35491 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clk2O35491 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Clk2O35491 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clk2O35491 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.58■□□□□ 0.56
Clk2O35491 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.58■□□□□ 0.56
Clk2O35491 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.58■□□□□ 0.56
Clk2O35491 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clk2O35491 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.58■□□□□ 0.56
Clk2O35491 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clk2O35491 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clk2O35491 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clk2O35491 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clk2O35491 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.58■□□□□ 0.56
Clk2O35491 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clk2O35491 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clk2O35491 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.57■□□□□ 0.56
Clk2O35491 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Clk2O35491 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Clk2O35491 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.57■□□□□ 0.56
Clk2O35491 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.57■□□□□ 0.56
Clk2O35491 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.57■□□□□ 0.56
Clk2O35491 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Clk2O35491 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clk2O35491 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Clk2O35491 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms