Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Efnb3O35393 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Efnb3O35393 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.54□□□□□ -0.24
Efnb3O35393 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Efnb3O35393 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Efnb3O35393 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Gm37179-201ENSMUST00000194862 823 ntBASIC13.53□□□□□ -0.24
Efnb3O35393 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.53□□□□□ -0.24
Efnb3O35393 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.53□□□□□ -0.24
Efnb3O35393 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.53□□□□□ -0.24
Efnb3O35393 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.53□□□□□ -0.24
Efnb3O35393 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Efnb3O35393 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Efnb3O35393 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Efnb3O35393 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Efnb3O35393 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Efnb3O35393 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Efnb3O35393 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Efnb3O35393 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Efnb3O35393 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Efnb3O35393 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Efnb3O35393 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Efnb3O35393 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Efnb3O35393 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Efnb3O35393 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Efnb3O35393 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Efnb3O35393 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Efnb3O35393 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Dancr-204ENSMUST00000132389 2347 ntBASIC13.52□□□□□ -0.25
Efnb3O35393 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.52□□□□□ -0.25
Efnb3O35393 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Efnb3O35393 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Efnb3O35393 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Efnb3O35393 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Efnb3O35393 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Efnb3O35393 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.51□□□□□ -0.25
Efnb3O35393 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.51□□□□□ -0.25
Efnb3O35393 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Efnb3O35393 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Efnb3O35393 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Efnb3O35393 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.5□□□□□ -0.25
Efnb3O35393 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.5□□□□□ -0.25
Efnb3O35393 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.5□□□□□ -0.25
Efnb3O35393 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.5□□□□□ -0.25
Efnb3O35393 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Efnb3O35393 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.5□□□□□ -0.25
Efnb3O35393 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Efnb3O35393 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms