Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.29■□□□□ 0.52
Cpsf2O35218 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.29■□□□□ 0.52
Cpsf2O35218 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.29■□□□□ 0.52
Cpsf2O35218 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.29■□□□□ 0.52
Cpsf2O35218 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf2O35218 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf2O35218 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.28■□□□□ 0.52
Cpsf2O35218 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.28■□□□□ 0.52
Cpsf2O35218 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cpsf2O35218 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf2O35218 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.28■□□□□ 0.52
Cpsf2O35218 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf2O35218 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Cpsf2O35218 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf2O35218 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf2O35218 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf2O35218 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf2O35218 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf2O35218 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf2O35218 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.26■□□□□ 0.51
Cpsf2O35218 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.26■□□□□ 0.51
Cpsf2O35218 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf2O35218 Gm42545-201ENSMUST00000202755 922 ntBASIC18.26■□□□□ 0.51
Cpsf2O35218 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.26■□□□□ 0.51
Cpsf2O35218 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf2O35218 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cpsf2O35218 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.25■□□□□ 0.51
Cpsf2O35218 Gm13158-201ENSMUST00000122007 736 ntBASIC18.25■□□□□ 0.51
Cpsf2O35218 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf2O35218 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.25■□□□□ 0.51
Cpsf2O35218 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf2O35218 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.24■□□□□ 0.51
Cpsf2O35218 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.24■□□□□ 0.51
Cpsf2O35218 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf2O35218 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf2O35218 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf2O35218 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf2O35218 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms