Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2b3O09039 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sh2b3O09039 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2b3O09039 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sh2b3O09039 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2b3O09039 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2b3O09039 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2b3O09039 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2b3O09039 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sh2b3O09039 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.22■□□□□ 0.03
Sh2b3O09039 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.22■□□□□ 0.03
Sh2b3O09039 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sh2b3O09039 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.22■□□□□ 0.03
Sh2b3O09039 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sh2b3O09039 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sh2b3O09039 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sh2b3O09039 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2b3O09039 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Sh2b3O09039 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sh2b3O09039 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2b3O09039 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2b3O09039 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2b3O09039 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.21■□□□□ 0.03
Sh2b3O09039 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2b3O09039 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2b3O09039 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Sh2b3O09039 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.21■□□□□ 0.03
Sh2b3O09039 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.21■□□□□ 0.03
Sh2b3O09039 Gm21362-201ENSMUST00000194272 928 ntBASIC15.21■□□□□ 0.03
Sh2b3O09039 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2b3O09039 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2b3O09039 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2b3O09039 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2b3O09039 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2b3O09039 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2b3O09039 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2b3O09039 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2b3O09039 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sh2b3O09039 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sh2b3O09039 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Gm10418-201ENSMUST00000100943 576 ntBASIC15.2■□□□□ 0.02
Sh2b3O09039 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.2■□□□□ 0.02
Sh2b3O09039 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sh2b3O09039 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2b3O09039 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sh2b3O09039 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Gm13401-201ENSMUST00000117074 291 ntBASIC15.19■□□□□ 0.02
Sh2b3O09039 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.19■□□□□ 0.02
Sh2b3O09039 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh2b3O09039 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Sh2b3O09039 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.19■□□□□ 0.02
Sh2b3O09039 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.19■□□□□ 0.02
Sh2b3O09039 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.19■□□□□ 0.02
Sh2b3O09039 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sh2b3O09039 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sh2b3O09039 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2b3O09039 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2b3O09039 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms