Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ercc2O08811 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ercc2O08811 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ercc2O08811 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ercc2O08811 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.51■□□□□ 0.39
Ercc2O08811 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.51■□□□□ 0.39
Ercc2O08811 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc2O08811 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Ercc2O08811 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ercc2O08811 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.5■□□□□ 0.39
Ercc2O08811 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Ercc2O08811 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.5■□□□□ 0.39
Ercc2O08811 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.5■□□□□ 0.39
Ercc2O08811 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.5■□□□□ 0.39
Ercc2O08811 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc2O08811 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.49■□□□□ 0.39
Ercc2O08811 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.49■□□□□ 0.39
Ercc2O08811 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ercc2O08811 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ercc2O08811 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ercc2O08811 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.49■□□□□ 0.39
Ercc2O08811 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ercc2O08811 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ercc2O08811 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ercc2O08811 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Ercc2O08811 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc2O08811 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Ercc2O08811 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.48■□□□□ 0.39
Ercc2O08811 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ercc2O08811 Gm27463-201ENSMUST00000183569 57 ntBASIC17.48■□□□□ 0.39
Ercc2O08811 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.48■□□□□ 0.39
Ercc2O08811 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Gm30025-201ENSMUST00000218555 728 ntBASIC17.48■□□□□ 0.39
Ercc2O08811 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.48■□□□□ 0.39
Ercc2O08811 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.48■□□□□ 0.39
Ercc2O08811 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ercc2O08811 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ercc2O08811 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ercc2O08811 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms