Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.01■□□□□ 0.79
Tcof1O08784 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Tcof1O08784 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20■□□□□ 0.79
Tcof1O08784 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Tcof1O08784 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20■□□□□ 0.79
Tcof1O08784 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcof1O08784 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20■□□□□ 0.79
Tcof1O08784 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Tcof1O08784 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.99■□□□□ 0.79
Tcof1O08784 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Tcof1O08784 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.99■□□□□ 0.79
Tcof1O08784 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.99■□□□□ 0.79
Tcof1O08784 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Tcof1O08784 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Tcof1O08784 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.99■□□□□ 0.79
Tcof1O08784 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Tcof1O08784 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Tcof1O08784 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Tcof1O08784 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Tcof1O08784 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.99■□□□□ 0.79
Tcof1O08784 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.99■□□□□ 0.79
Tcof1O08784 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Tcof1O08784 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.99■□□□□ 0.79
Tcof1O08784 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tcof1O08784 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tcof1O08784 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tcof1O08784 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.98■□□□□ 0.79
Tcof1O08784 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tcof1O08784 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tcof1O08784 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tcof1O08784 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tcof1O08784 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tcof1O08784 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tcof1O08784 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tcof1O08784 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tcof1O08784 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Tcof1O08784 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Tcof1O08784 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tcof1O08784 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tcof1O08784 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Tcof1O08784 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tcof1O08784 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tcof1O08784 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.97■□□□□ 0.79
Tcof1O08784 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Tcof1O08784 Gm7367-201ENSMUST00000057611 492 ntBASIC19.97■□□□□ 0.79
Tcof1O08784 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Tcof1O08784 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Tcof1O08784 Gm13474-201ENSMUST00000122466 815 ntBASIC19.96■□□□□ 0.79
Tcof1O08784 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
Tcof1O08784 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.96■□□□□ 0.79
Tcof1O08784 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcof1O08784 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcof1O08784 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcof1O08784 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Tcof1O08784 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Tcof1O08784 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Tcof1O08784 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcof1O08784 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcof1O08784 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcof1O08784 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Tcof1O08784 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcof1O08784 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcof1O08784 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcof1O08784 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Tcof1O08784 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Tcof1O08784 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms