Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.34■□□□□ 0.53
Usp35M0QWN7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Gm21362-201ENSMUST00000194272 928 ntBASIC18.34■□□□□ 0.53
Usp35M0QWN7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.34■□□□□ 0.53
Usp35M0QWN7 Gm4974-201ENSMUST00000209974 875 ntBASIC18.34■□□□□ 0.53
Usp35M0QWN7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp35M0QWN7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp35M0QWN7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp35M0QWN7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp35M0QWN7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp35M0QWN7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.33■□□□□ 0.52
Usp35M0QWN7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp35M0QWN7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp35M0QWN7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Usp35M0QWN7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.31■□□□□ 0.52
Usp35M0QWN7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Gm10418-201ENSMUST00000100943 576 ntBASIC18.31■□□□□ 0.52
Usp35M0QWN7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.31■□□□□ 0.52
Usp35M0QWN7 Gm45058-201ENSMUST00000205810 766 ntBASIC18.31■□□□□ 0.52
Usp35M0QWN7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp35M0QWN7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Gm7367-201ENSMUST00000057611 492 ntBASIC18.3■□□□□ 0.52
Usp35M0QWN7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp35M0QWN7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp35M0QWN7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Usp35M0QWN7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Usp35M0QWN7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp35M0QWN7 Gm2274-201ENSMUST00000184539 609 ntBASIC18.29■□□□□ 0.52
Usp35M0QWN7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp35M0QWN7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp35M0QWN7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms