Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44357-201ENSMUST00000195897 142 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm19658-201ENSMUST00000196231 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44367-201ENSMUST00000196836 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44350-201ENSMUST00000197197 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44390-201ENSMUST00000197533 144 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44313-201ENSMUST00000198018 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44486-201ENSMUST00000198508 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44454-201ENSMUST00000198541 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm43514-201ENSMUST00000198852 424 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44314-201ENSMUST00000199263 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44394-201ENSMUST00000199558 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44484-201ENSMUST00000199873 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44466-201ENSMUST00000200264 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm44359-201ENSMUST00000200671 138 ntBASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc180J3QNE4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc180J3QNE4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc180J3QNE4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
Ccdc180J3QNE4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc180J3QNE4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC31.11■■■□□ 2.57
Ccdc180J3QNE4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Ccdc180J3QNE4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc180J3QNE4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC31.11■■■□□ 2.57
Ccdc180J3QNE4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc180J3QNE4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc180J3QNE4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc180J3QNE4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC31.1■■■□□ 2.57
Ccdc180J3QNE4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 AC153794.1-201ENSMUST00000169148 126 ntBASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc180J3QNE4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
Ccdc180J3QNE4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc180J3QNE4 Gm18733-201ENSMUST00000173950 856 ntBASIC31.08■■■□□ 2.57
Ccdc180J3QNE4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc180J3QNE4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc180J3QNE4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC31.08■■■□□ 2.57
Ccdc180J3QNE4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc180J3QNE4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Ccdc180J3QNE4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
Ccdc180J3QNE4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc180J3QNE4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc180J3QNE4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc180J3QNE4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc180J3QNE4 Gm12644-201ENSMUST00000119935 606 ntBASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccdc180J3QNE4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc180J3QNE4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc180J3QNE4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc180J3QNE4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC31.05■■■□□ 2.56
Ccdc180J3QNE4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc180J3QNE4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC31.05■■■□□ 2.56
Ccdc180J3QNE4 AC161829.1-201ENSMUST00000220298 281 ntBASIC31.05■■■□□ 2.56
Ccdc180J3QNE4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC31.05■■■□□ 2.56
Ccdc180J3QNE4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 Gm10052-201ENSMUST00000168019 960 ntBASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 Gm7729-201ENSMUST00000050143 801 ntBASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc180J3QNE4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc180J3QNE4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC31.03■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms