Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx1-1G3UXB3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Gm25026-201ENSMUST00000175017 188 ntBASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Gm29288-201ENSMUST00000191582 901 ntBASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 CT009711.2-202ENSMUST00000224538 973 ntBASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx1-1G3UXB3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Gm27867-201ENSMUST00000184778 125 ntBASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Gm38188-201ENSMUST00000192879 856 ntBASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.49■□□□□ 0.71
Nkx1-1G3UXB3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx1-1G3UXB3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nkx1-1G3UXB3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Gm13505-201ENSMUST00000121666 817 ntBASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Gm15173-201ENSMUST00000122049 433 ntBASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx1-1G3UXB3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx1-1G3UXB3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx1-1G3UXB3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx1-1G3UXB3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx1-1G3UXB3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms