Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Gm6296-201ENSMUST00000222599 943 ntBASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.61■□□□□ 0.41
Col4a6B1AVK5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a6B1AVK5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Gm13312-201ENSMUST00000119631 718 ntBASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a6B1AVK5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Gm15165-201ENSMUST00000118140 502 ntBASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Mir5131-201ENSMUST00000175426 93 ntBASIC17.59■□□□□ 0.41
Col4a6B1AVK5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a6B1AVK5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Col4a6B1AVK5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Col4a6B1AVK5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a6B1AVK5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Col4a6B1AVK5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a6B1AVK5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a6B1AVK5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a6B1AVK5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms