Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Col6a5A6H584 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a5A6H584 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.92□□□□□ -0.34
Col6a5A6H584 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.92□□□□□ -0.34
Col6a5A6H584 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Col6a5A6H584 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a5A6H584 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a5A6H584 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a5A6H584 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a5A6H584 Gm13042-201ENSMUST00000119244 1955 ntBASIC12.9□□□□□ -0.34
Col6a5A6H584 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a5A6H584 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Gm11780-201ENSMUST00000136880 516 ntBASIC12.9□□□□□ -0.34
Col6a5A6H584 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.9□□□□□ -0.34
Col6a5A6H584 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a5A6H584 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Col6a5A6H584 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.9□□□□□ -0.35
Col6a5A6H584 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a5A6H584 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a5A6H584 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Col6a5A6H584 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col6a5A6H584 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.89□□□□□ -0.35
Col6a5A6H584 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Col6a5A6H584 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.89□□□□□ -0.35
Col6a5A6H584 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a5A6H584 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a5A6H584 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a5A6H584 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.89□□□□□ -0.35
Col6a5A6H584 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Phf7-203ENSMUST00000226565 1971 ntBASIC12.88□□□□□ -0.35
Col6a5A6H584 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm4535-201ENSMUST00000182274 558 ntBASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm10355-201ENSMUST00000097146 517 ntBASIC12.88□□□□□ -0.35
Col6a5A6H584 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Col6a5A6H584 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.88□□□□□ -0.35
Col6a5A6H584 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Col6a5A6H584 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm13312-201ENSMUST00000119631 718 ntBASIC12.88□□□□□ -0.35
Col6a5A6H584 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a5A6H584 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.88□□□□□ -0.35
Col6a5A6H584 AV026068-213ENSMUST00000223675 1171 ntBASIC12.88□□□□□ -0.35
Col6a5A6H584 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms