Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
IsxA1A546 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.94■□□□□ 0.14
IsxA1A546 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
IsxA1A546 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
IsxA1A546 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.94■□□□□ 0.14
IsxA1A546 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
IsxA1A546 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IsxA1A546 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.94■□□□□ 0.14
IsxA1A546 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.93■□□□□ 0.14
IsxA1A546 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
IsxA1A546 Gm42642-201ENSMUST00000200683 355 ntBASIC15.93■□□□□ 0.14
IsxA1A546 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.93■□□□□ 0.14
IsxA1A546 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.93■□□□□ 0.14
IsxA1A546 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.93■□□□□ 0.14
IsxA1A546 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.93■□□□□ 0.14
IsxA1A546 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
IsxA1A546 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
IsxA1A546 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
IsxA1A546 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
IsxA1A546 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IsxA1A546 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.92■□□□□ 0.14
IsxA1A546 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
IsxA1A546 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.92■□□□□ 0.14
IsxA1A546 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
IsxA1A546 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.92■□□□□ 0.14
IsxA1A546 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.92■□□□□ 0.14
IsxA1A546 Gm42569-201ENSMUST00000200539 472 ntBASIC15.92■□□□□ 0.14
IsxA1A546 Gm18671-201ENSMUST00000214826 683 ntBASIC15.92■□□□□ 0.14
IsxA1A546 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.92■□□□□ 0.14
IsxA1A546 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
IsxA1A546 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
IsxA1A546 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
IsxA1A546 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.91■□□□□ 0.14
IsxA1A546 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.91■□□□□ 0.14
IsxA1A546 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.91■□□□□ 0.14
IsxA1A546 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
IsxA1A546 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IsxA1A546 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
IsxA1A546 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.9■□□□□ 0.14
IsxA1A546 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.9■□□□□ 0.14
IsxA1A546 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
IsxA1A546 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IsxA1A546 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms