Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.1■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Gm7370-201ENSMUST00000219471 767 ntBASIC18.1■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.08■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.08■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms