Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc194A0A140LIT1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc194A0A140LIT1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Gm27275-201ENSMUST00000184318 272 ntBASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc194A0A140LIT1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Gm18025-201ENSMUST00000221733 862 ntBASIC17.02■□□□□ 0.32
Ccdc194A0A140LIT1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc194A0A140LIT1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.02■□□□□ 0.31
Ccdc194A0A140LIT1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc194A0A140LIT1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc194A0A140LIT1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc194A0A140LIT1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc194A0A140LIT1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms