Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Trbv20A0A0B4J1H5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv20A0A0B4J1H5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Gm13401-201ENSMUST00000117074 291 ntBASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trbv20A0A0B4J1H5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv20A0A0B4J1H5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv20A0A0B4J1H5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trbv20A0A0B4J1H5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.33■□□□□ 0.05
Trbv20A0A0B4J1H5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv20A0A0B4J1H5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv20A0A0B4J1H5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv20A0A0B4J1H5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms