Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav21-dv12A0A075B6C4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav21-dv12A0A075B6C4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav21-dv12A0A075B6C4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Gm12441-201ENSMUST00000121806 588 ntBASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Gm20049-201ENSMUST00000219950 730 ntBASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav21-dv12A0A075B6C4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav21-dv12A0A075B6C4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav21-dv12A0A075B6C4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms