Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6d-5A0A075B6B9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-5A0A075B6B9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-5A0A075B6B9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.83□□□□□ -0.19
Trav6d-5A0A075B6B9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-5A0A075B6B9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-5A0A075B6B9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6d-5A0A075B6B9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm11643-201ENSMUST00000119578 864 ntBASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6d-5A0A075B6B9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm7514-201ENSMUST00000209475 934 ntBASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-5A0A075B6B9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-5A0A075B6B9 Flg-201ENSMUST00000050758 1488 ntBASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-5A0A075B6B9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms