Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-5A0A075B6B5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-5A0A075B6B5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-5A0A075B6B5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-5A0A075B6B5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-5A0A075B6B5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-5A0A075B6B5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-5A0A075B6B5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-5A0A075B6B5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-5A0A075B6B5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav6-5A0A075B6B5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-5A0A075B6B5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.25□□□□□ -0.29
Trav6-5A0A075B6B5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms