Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav5-4A0A075B652 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Gm11643-201ENSMUST00000119578 864 ntBASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav5-4A0A075B652 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Gm13158-201ENSMUST00000122007 736 ntBASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Gm27275-201ENSMUST00000184318 272 ntBASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav5-4A0A075B652 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Haglr-201ENSMUST00000100000 2085 ntBASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav5-4A0A075B652 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms