Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-1A0A075B644 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-1A0A075B644 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Gm13401-201ENSMUST00000117074 291 ntBASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-1A0A075B644 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Gm11539-201ENSMUST00000119837 557 ntBASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Gm13436-201ENSMUST00000120418 567 ntBASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Gm27463-201ENSMUST00000183569 57 ntBASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms