Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6n-5A0A075B621 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-5A0A075B621 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-5A0A075B621 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-5A0A075B621 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-5A0A075B621 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-5A0A075B621 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-5A0A075B621 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6n-5A0A075B621 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav6n-5A0A075B621 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6n-5A0A075B621 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6n-5A0A075B621 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms