Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Rab3c-203ENSMUST00000224180 967 ntBASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm5874-201ENSMUST00000096101 508 ntBASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-1A0A075B5Z8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-1A0A075B5Z8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm6576-201ENSMUST00000169678 883 ntBASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Mtag2-201ENSMUST00000058665 714 ntBASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-1A0A075B5Z8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms