Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm7213-201ENSMUST00000215977 950 ntBASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav5-1A0A075B5Z7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav5-1A0A075B5Z7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5-1A0A075B5Z7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trav5-1A0A075B5Z7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5-1A0A075B5Z7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav5-1A0A075B5Z7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav5-1A0A075B5Z7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm6659-201ENSMUST00000174752 547 ntBASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav5-1A0A075B5Z7 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms