Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav1A0A075B5Z4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav1A0A075B5Z4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Gm10653-202ENSMUST00000139570 835 ntBASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Gm9731-201ENSMUST00000209480 747 ntBASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav1A0A075B5Z4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Gm20760-201ENSMUST00000179197 648 ntBASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav1A0A075B5Z4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms