Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.15■□□□□ 0.34
Trbv4A0A075B5I2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trbv4A0A075B5I2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trbv4A0A075B5I2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trbv4A0A075B5I2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Gm715-201ENSMUST00000117865 831 ntBASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Gm22240-201ENSMUST00000175225 82 ntBASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv4A0A075B5I2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.12■□□□□ 0.33
Trbv4A0A075B5I2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv4A0A075B5I2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Gm13216-201ENSMUST00000117145 591 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms